Publications

1994-2000 2001-2005 2006-2010 2011-present

    2011-present

  • P. A. Gurnev, Torri C. Roark, H. I. Petrache, A. J. Sodt, S. M. Bezrukov. Cation-selective channel is regulated by anions according to their Hofmeister ranking. Angewandte Chemie , in press.

  • Y. Matam, B. D. Ray, H. I. Petrache. Direct affinity of dopamine to lipid membranes investigated by Nuclear Magnetic Resonance spectroscopy. Neuroscience Letters , 618, 104-109, 2016.

  • H. Jashnsaz, T. Nguyen, H. I. Petrache, S. Presse. Inferring models of bacterial dynamics toward point sources. PLOS One , 10, e0140428, 2015.

  • M. A. Johnson, B. D. Ray, S. R. Wassall, H. I. Petrache. Equivalent isopropanol concentrations of aromatic amino acids interactions with lipid vesicles. Journal of Membrane Biology , 248, 695-703, 2015.

  • M. A. Johnson, S. Seifert, H. I. Petrache, A. C. Kimble-Hill. Phase coexistence in single-lipid membranes induced by buffering agents. Langmuir , 30, 9880-9885, 2014.

  • H. I. Petrache. Coset Group Construction of Multidimensional Number Systems. Symmetry 6, 578-588, 2014. [ http://www.mdpi.com/2073-8994/6/3/578]

  • J. J. Kinnun, K.J. Mallikarjunaiah, H. I. Petrache, M. F. Brown. Area per lipid and elastic deformation of membranes: Atomistic view from solid-state deuterium NMR spectroscopy. Biochim. Biophys. Acta , in press.

  • M. J. Justice, D. N. Petrusca, A. L. Rogozea, J. A. Williams, K. S. Schweitzer, I. Petrache, S. R. Wassall, H. I. Petrache. Effects of lipid interactions on model vesicle engulfment by alveolar macrophages. Biophys. J., 106, 598-609, 2014.

  • H. I. Petrache. Correspondence between geometric and differential definitions of the sine and cosine, College Math. J., 45, 11-15, 2014. http://arxiv.org/abs/1110.6106

  • W. E. Teague, O. Soubias, H. I. Petrache, N. Fuller, K. G. Hines, R. P. Rand, K. Gawrisch. Elastic properties of polyunsaturated phosphatidylethanolamines influence rhodopsin function. Faraday Discuss 161, 383-395, 2013.

  • A. D. Lockett, M. VanDemark, Y. Gu, K. S. Schweitzer, N. Sigua, K. Kamocki, I. Fijalkowska, J. Garrison, A. J. Fisher, K. Serban, R. A. Wise, T. R. Flotte, C. Mueller, R. G. Presson, H. I. Petrache, R. M. Tuder, I. Petrache. Effect of cigarette smoke exposure and structual modifications on the alpha-1 antitrypsin interaction with caspases. Molecular Medicine 18, 445-454, 2012.

  • M. M. Koerner, L. A. Palacio, J. W. Wright, K. S. Schweitzer, B. D. Ray, H. I. Petrache, Electrodynamics of lipid membrane interactions in the presence of zwitterionic buffers. Biophys. J. 101, 362-369, 2011.

  • K. Szymanski, H. I. Petrache, Composite polarizability and the construction of an invariant function of refraction and mass density for solutions. J. Chem. Phys. 134, 144701, 2011.

  • H. I. Petrache. Lipid Bilayer Structure. In Comprehensive Biophysics, Tamm, L. (Ed.), Elsevier, in press.

  • Mallikarjunaiah K. J., Leftin A., Kinnun J. J., Justice M. J., Rogozea A. L., Petrache H. I., Brown M. F. 2H NMR shows equivalence of dehydration and osmotic pressures in lipid membrane deformation. Biophysical Journal 100, 98-107, 2011.

      • 2006-2010

    • Fan Xu, HangYu Zhang, Jan Ilavsky, Lia Stanciu, Derek Ho, Matthew J. Justice, Horia I. Petrache, and Jian Xie. Investigation of a Catalyst Ink Dispersion Using Both Ultra-Small-Angle X-ray Scattering and Cryogenic TEM. Langmuir 26, 19199-19208, 2010.

    • David P. Brownholland, Gabriel S. Longo, Andrey V. Struts, Matthew J. Justice, Igal Szleifer, Horia I. Petrache, Michael F. Brown, David H. Thompson. Phase separation in binary mixtures of bipolar and monopolar lipid dispersions revealed by 2H NMR spectroscopy, small-angle x-ray scattering, and molecular theory. Biophys. J. 97, 2700-2709, 2009. [pdf]

    • D. Danino, E. Kesselman, G. Saper, H. I. Petrache, and D. Harries. Osmotically-induced reversible transitions in lipid-DNA mesophases. Biophys. J. 96, L43-45, 2009. [pdf]

    • T. K. Rostovtseva, H. I. Petrache, N. Kazemi, E. Hassanzadeh, and S. M. Bezrukov. Interfacial Polar Interactions Affect Gramicidin Channel Kinetics. Biophys. J. 94, L23-25, 2008. [pdf]

    • H. I. Petrache, D. Harries, and V. A. Parsegian. Measurement of Lipid forces by X-ray Diffraction and Osmotic Stress. In Methods in Membrane Lipids, A. Dopico (ed.), Humana, 2007. [pdf]

    • H. I. Petrache and M. F. Brown. X-ray Scattering and Solid-State 2H NMR Probes of Structural Fluctuations in Lipid Membranes. In Methods in Membrane Lipids, A. Dopico (ed.), Humana, 2007. [pdf]

    • I. Petrache, I. Fijalkowska, T. R. Medler, J. Skirball, P. Cruz, L. Zhen, H. I. Petrache, T. R. Flotte, and R. M. Tuder. alpha-1 Antitrypsin Inhibits Caspase-3 Activity, Preventing Lung Endothelial Cell Apoptosis. Am. J. Path. 2006, 169:1155-1166. [pdf]

    • H. I. Petrache, S. Tristram-Nagle, D. Harries, N. Kucerka, J. F. Nagle, and V. A. Parsegian. Swelling of Phospholipids by Monovalent Salt. J. Lipid Res. 2006, 47:302-309. [pdf]

    • M. C. Gondre-Lewis, H. I. Petrache, C. A. Wassif, D. Harries, A. Parsegian, F. D. Porter, and Y. P. Loh. Abnormal Sterols in Cholesterol-Deficiency Diseases Cause Secretory Granule Malformation and Decreased Membrane Curvature. J. Cell Science, 2006, 119:1876-1885. [pdf]

    • H. I. Petrache, T. Zemb, L. Belloni, and V. Ad. Parsegian. Salt Screening and Specific Ion Adsorption Determine Neutral-Lipid Membrane Interactions. Proc. Natl. Acad. Sci., 2006, 103:7982-7987. [pdf]

      • 2001-2005

    • H. I. Petrache, I. Kimchi, D. Harries, and V. A. Parsegian. Measured Depletion of Ions at the Biomembrane Interface. J. Am. Chem. Soc., 2005, 127:11546-11547. [pdf]

    • K. Rajamoorthi, H. I. Petrache, T. J. McIntosh, and M. F. Brown. Packing and Viscoelasticity of Polyunsaturated omega-3 and omega-6 Lipid Bilayers as seen by 2H NMR and X-ray Diffraction. J. Am. Chem. Soc., 2005, 127:1576-1588. [pdf]

    • N. Kucerka, Y. Liu, N. Chu, H. I. Petrache, S. Tristram-Nagle, and J. F. Nagle. Structure of Fully Hydrated Fluid Phase DMPC and DLPC Lipid Bilayers Using X-Ray Scattering from Oriented Multilamellar Arrays and from Unilamellar Vesicles. Biophys. J. 2005, 88:2626-2637. [pdf]

    • H. I. Petrache, D. Harries, and V. A. Parsegian. Alteration of Lipid Membrane Rigidity by Cholesterol and Its Metabolic Precursors. Macromol. Symp., 2005, 219:39-50. [pdf]

    • H. Nanda, J. N. Sachs, H. I. Petrache, and T. B. Woolf. Environmental Effects on Glycophorin A Folding and Structure Examined through Molecular Simulations. J. Chem. Theory Comput., 2005, 1:375-388. [pdf]

    • J. N. Sachs, H. Nanda, H. I. Petrache, and T. B. Woolf. Changes in Phosphatidylcholine Headgroup Tilt and Water Order Induced by Monovalent Salts: Molecular Dynamics Simulations. Biophys. J. 2004, 86:3772-3782. [pdf]

    • H. I. Petrache, S. Tristram-Nagle, K. Gawrisch, D. Harries, V. A. Parsegian, and J. F. Nagle. Structure and Fluctuations of Charged Phophatidylserine Bilayers in the Absence of Salt. Biophys. J. 2004, 86:1574-1586. [pdf]

    • J. N. Sachs, H. I. Petrache, and T. B. Woolf. Interpretation of Small Angle X-ray Measurements Guided by Molecular Dynamics Simulations of Lipid Bilayers. Chem. Phys. Lipids. 2003, 126:211-223. [pdf]

    • J. N. Sachs, H. I. Petrache, D. M. Zuckerman, and T. B. Woolf. Molecular Dynamics Simulations of Ionic Concentration Gradients Across Model Bilayers. J. Chem. Phys. 2003, 118:1957-1969. [pdf]

    • H. I. Petrache, D. M. Zuckerman, J. N. Sachs, J. A. Killian, R. E. Koeppe II, and T. B. Woolf. Hydrophobic Matching Mechanism Investigated by Molecular Dynamics Simulations. Langmuir 2002, 18:1340-1351. [pdf]

    • H. I. Petrache, A. Salmon, and M. F. Brown. Structural Properties of Docosahexaenoyl Phospholipid Bilayers Investigated by Solid-state 2H NMR Spectroscopy. J. Am. Chem. Soc. 2001, 123:12611-12622. [pdf]

      • 1994-2000

    • H. I. Petrache, A. Grossfield, K. R. MacKenzie, D. M. Engelman, and T. B. Woolf. Modulation of Glycophorin A Transmembrane Helix Interactions by Lipid Bilayers: Molecular Dynamics Calculations. J. Mol. Biol. 2000, 302:727-746. [pdf]

    • H. I. Petrache, S. W. Dodd, and M. F. Brown. Area per Lipid and Acyl Length Distributions in Fluid Phosphatidylcholines Determined by 2H NMR Spectroscopy. Biophys. J. 2000, 79:3172-3192. [pdf]

    • H.I. Petrache, K. Tu, and J. F. Nagle. Analysis of Simulated NMR Order Parameters for Lipid Bilayer Structure Determination. Biophys. J. 1999, 76:2479-2487. [pdf]

    • H. I. Petrache, Structure and Interactions of Fluid Phospholipid Bilayers Measured by High Resolution X-ray Scattering, Ph.D. Thesis, Carnegie Mellon University, 1998. [pdf]

    • J. F. Nagle, H. I. Petrache, N. Gouliaev, S. Tristram-Nagle, Y. Liu, R. M. Suter, and K. Gawrisch. Multiple Mechanisms for Critical Behavior in the Biologically Relevant Phase of Lecithin Bilayers. Phys. Rev. E 1998, 58:7769-7776. [pdf]

    • H. I. Petrache, S. Tristram-Nagle, and J. F. Nagle. Fluid Phase Structure of EPC and DMPC Bilayers. Chem. Phys. Lipids. 1998, 95:83-94. [pdf]

    • S. Tristram-Nagle, H. I. Petrache, and J. F. Nagle. Structure and Interactions of Fully Hydrated Dioleoylphosphatidylcholine Bilayers. Biophys. J. 1998, 75:917-925. [pdf]

    • H. I. Petrache, N. Gouliaev, S. Tristram-Nagle, R. Zhang, R. M. Suter, and J. F. Nagle. Interbilayer Interactions from High Resolution X-Ray Scattering. Phys. Rev. E 1998, 57:7014-7024. [pdf]

    • S. Tristram-Nagle, T. Moore, H. I. Petrache, and J. F. Nagle. DMSO Produces a New Subgel Phase in DPPC: DSC and X-Ray Diffraction Study. Biochim. Biophys. Acta 1998, 1369:19-33. [pdf]

    • S. Tristram-Nagle, H. I. Petrache, R. M. Suter, and J. F. Nagle. Effect of Substrate Roughness on D Spacing Supports Theoretical Resolution of Vapor Pressure Paradox. Biophys. J. 1998, 74:1421-1427. [pdf]

    • H. I. Petrache, S. E. Feller, and J. F. Nagle. Determination of Component Volumes of Lipid Bilayers from Simulations. Biophys. J. 1997, 72:2237-2242. [pdf]

    • J. F. Nagle, R. Zhang, S. Tristram-Nagle, W. Sun, H. I. Petrache, and R. M. Suter. X-Ray Structure Determination of Fully Hydrated L-alpha Phase Dipalmitoylphosphatidylcholine Bilayers. Biophys. J. 1996, 70:1419-1431. [pdf]

    • G. Anzivino, F. Arzarello, G. Bari, M. Basile, L. Bellagamba, D. Boscherini, G. Bruni, P. Bruni, G. Cara Romeo, M. Chiarini, L. Cifarelli, F. Cindolo, F. Ciralli, A. Contin, M. Dardo, S. D'Auria, C. Del Papa, S. De Pasquale, F. Frasconi, P. Giusti, G. Iacobucci, G. Maccarrone, A. Margotti, T. Massam, R. Nania, H. I. Petrache, S. Qian, G. Sartorelli, Y. M. Shabelski, M. A. Stepanov, O. P. Strogova, R. Timellini, L. Votano, and A. Zichichi. Intrinsic Charm in pp and yp Interactions. Nuovo Cimento A (Italy) 1994, 107A:955-988.